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LOC4350831 non-specific phospholipase C4 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4350831, updated on 12-Jul-2024
Gene symbol
LOC4350831
Gene description
non-specific phospholipase C4
Locus tag
OSNPB_110593000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4350831 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (24516827..24523606, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (22569980..22576811, complement)

Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene CDK5RAP1-like protein Neighboring gene uncharacterized LOC4350830 Neighboring gene putative F-box protein At5g38270 Neighboring gene uncharacterized LOC107275573

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
non-specific phospholipase C4
Names
Os11g0593000

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

    Range
    24516827..24523606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015759952.3 → XP_015615438.1  non-specific phospholipase C4

    UniProtKB/TrEMBL
    A0A0P0Y3X8
    Conserved Domains (1) summary
    pfam04185
    Location:5 → 378
    Phosphoesterase; Phosphoesterase family
Nucleotide Protein
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