Format

Send to:

Choose Destination

LOC4350526 DNA replication licensing factor MCM2-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4350526, updated on 9-Aug-2018

Summary

Gene symbol
LOC4350526
Gene description
DNA replication licensing factor MCM2-like
Locus tag
OSNPB_110484300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
MCM2; OsMCM2; OsJ_33907
Expression
Broad expression in flower buds (RPKM 7.8), flowers (RPKM 5.8) and 5 other tissues See more

Genomic context

See LOC4350526 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
18
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (17046367..17052906)

Chromosome 11 - NC_029266.1Genomic Context describing neighboring genes Neighboring gene ELMO domain-containing protein A Neighboring gene pentatricopeptide repeat-containing protein At5g66520 Neighboring gene probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 Neighboring gene bifunctional dihydrofolate reductase-thymidylate synthase Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029266.1 Chromosome 11 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Homology

  • Homologs of the LOC4350526 gene: The LOC4350526 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

General protein information

Preferred Names
DNA replication licensing factor MCM2
Names
LOC_Os11g29380
Minichromosome maintenance protein 2
Os11g0484300

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029266.1 Reference IRGSP-1.0 Primary Assembly

    Range
    17046367..17052906
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015759702.2XP_015615188.1  DNA replication licensing factor MCM2

    UniProtKB/Swiss-Prot
    Q2R482
    Conserved Domains (4) summary
    smart00350
    Location:345856
    MCM; minichromosome maintenance proteins
    pfam12619
    Location:49182
    MCM2_N; Mini-chromosome maintenance protein 2
    pfam14551
    Location:246361
    MCM_N; MCM N-terminal domain
    cl21455
    Location:569708
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Support Center