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LOC4350057 putative disease resistance protein RGA1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4350057, updated on 16-Jun-2026
Gene symbol
LOC4350057
Gene description
putative disease resistance protein RGA1
Locus tag
OSNPB_110211300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (5832934..5843915, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (5776972..5787864, complement)

Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene alcohol dehydrogenase 2 Neighboring gene uncharacterized LOC136353944 Neighboring gene uncharacterized LOC9266905 Neighboring gene uncharacterized LOC136353945 Neighboring gene uncharacterized LOC136353946

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to fungus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
putative disease resistance protein RGA1
Names
Os11g0211300

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

    Range
    5832934..5843915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015760974.3 → XP_015616460.1  putative disease resistance protein RGA1

    UniProtKB/TrEMBL
    Q2R8Y8
    Conserved Domains (5) summary
    PLN03210
    Location:1176 → 1266
    PLN03210; Resistant to P. syringae 6; Provisional
    COG4886
    Location:562 → 886
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:639 → 662
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00931
    Location:183 → 410
    NB-ARC; NB-ARC domain
    pfam18052
    Location:14 → 106
    Rx_N; Rx N-terminal domain
Nucleotide Protein
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