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LOC4348383 small ribosomal subunit protein uS12 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4348383, updated on 3-Dec-2024
Gene symbol
LOC4348383
Gene description
small ribosomal subunit protein uS12
Locus tag
OSNPB_100350001
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (11112812..11151481, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (10591143..10630308, complement)

Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene cortical cell-delineating protein Neighboring gene cortical cell-delineating protein Neighboring gene probable apyrase 7 Neighboring gene transfer RNA methionine (anticodon CAU)

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
small ribosomal subunit protein uS12
Names
Os10g0350001
Os10g0350450

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

    Range
    11112812..11151481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015757836.3 → XP_015613322.3  small ribosomal subunit protein uS12

    UniProtKB/TrEMBL
    B9F6Z5
Nucleotide Protein
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