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LOC4347941 serine carboxypeptidase-like 15 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4347941, updated on 12-Jul-2024
Gene symbol
LOC4347941
Gene description
serine carboxypeptidase-like 15
Locus tag
OSNPB_100101100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (105282..108315, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (100403..103477, complement)

Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107279128 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 Neighboring gene serine carboxypeptidase-like 2 Neighboring gene uncharacterized LOC136353598

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in secondary metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
serine carboxypeptidase-like 15
Names
Os10g0101100

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

    Range
    105282..108315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015759539.3 → XP_015615025.1  serine carboxypeptidase-like 15 isoform X2

    UniProtKB/TrEMBL
    A0A8I3B2P3, Q0IZD7, Q33BK5, Q7G6W2, Q8W3C8
    Conserved Domains (1) summary
    pfam00450
    Location:48 → 457
    Peptidase_S10; Serine carboxypeptidase

  2. XM_015759538.3 → XP_015615024.1  serine carboxypeptidase-like 15 isoform X1

    UniProtKB/TrEMBL
    A0A8I3B2P3, Q7G6W2, Q8W3C8
    Conserved Domains (1) summary
    pfam00450
    Location:48 → 477
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
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