U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rhox8 reproductive homeobox 8 [ Mus musculus (house mouse) ]

Gene ID: 434768, updated on 26-Sep-2022

Summary

Official Symbol
Rhox8provided by MGI
Official Full Name
reproductive homeobox 8provided by MGI
Primary source
MGI:MGI:3579898
See related
Ensembl:ENSMUSG00000064137 AllianceGenome:MGI:3579898
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tox
Summary
Acts upstream of or within regulation of gene expression and spermatogenesis. Located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 2.9) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Rhox8 in Genome Data Viewer
Location:
X; X A3.3
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (36963657..36979643, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (37874780..37890766, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene reproductive homeobox 6 Neighboring gene reproductive homeobox 7A Neighboring gene reproductive homeobox 7B Neighboring gene reproductive homeobox 9 Neighboring gene reproductive homeobox 11, pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General protein information

Preferred Names
reproductive homeobox on X chromosome, 8
Names
homeoprotein TOX

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001004193.3NP_001004193.1  reproductive homeobox on X chromosome, 8

    See identical proteins and their annotated locations for NP_001004193.1

    Status: VALIDATED

    Source sequence(s)
    AL590629, AY329370
    Consensus CDS
    CCDS30082.1
    UniProtKB/TrEMBL
    Q6VSS7
    Related
    ENSMUSP00000071782.6, ENSMUST00000071885.7
    Conserved Domains (1) summary
    cd00086
    Location:261317
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    36963657..36979643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011251014.1XP_011249316.1  reproductive homeobox on X chromosome, 8 isoform X1

    See identical proteins and their annotated locations for XP_011249316.1

    Conserved Domains (1) summary
    cd00086
    Location:237293
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.