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LOC4347490 probable glucan endo-1,3-beta-glucosidase A6 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4347490, updated on 16-Jun-2026
Gene symbol
LOC4347490
Gene description
probable glucan endo-1,3-beta-glucosidase A6
Locus tag
OSNPB_090502200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (23844711..23848472, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (19433943..19437950, complement)

Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL32z Neighboring gene probable GPI-anchored adhesin-like protein PGA55 Neighboring gene uncharacterized LOC112936447 Neighboring gene chloroplast envelope quinone oxidoreductase homolog Neighboring gene F-box/FBD/LRR-repeat protein At1g13570

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
probable glucan endo-1,3-beta-glucosidase A6
Names
Os09g0502200

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

    Range
    23844711..23848472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015755169.3 → XP_015610655.1  probable glucan endo-1,3-beta-glucosidase A6 isoform X2

    UniProtKB/TrEMBL
    B8BDC8
    Conserved Domains (2) summary
    smart00768
    Location:384 → 472
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:31 → 357
    Glyco_hydro; Glycosyl hydrolases

  2. XM_015755168.3 → XP_015610654.1  probable glucan endo-1,3-beta-glucosidase A6 isoform X1

    UniProtKB/TrEMBL
    Q0J0Q3
    Conserved Domains (2) summary
    smart00768
    Location:387 → 475
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:34 → 360
    Glyco_hydro; Glycosyl hydrolases
Nucleotide Protein
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