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LOC4347125 glutamate receptor 2.8 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4347125, updated on 16-Jun-2026
Gene symbol
LOC4347125
Gene description
glutamate receptor 2.8
Locus tag
OSNPB_090431100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (20131638..20141553)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (15752882..15762835)

Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene zinc finger protein GIS3 Neighboring gene glutamate receptor 2.9 Neighboring gene transcription factor MYB36

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
glutamate receptor 2.8
Names
OSJNBa0016E03.34
Os09g0431100
putative Avr9/Cf-9 rapidly elicited protein 141

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

    Range
    20131638..20141553
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015795964.3 → XP_015651450.1  glutamate receptor 2.8

    UniProtKB/TrEMBL
    B8BFC6, Q69NA5
    Conserved Domains (3) summary
    cd13686
    Location:450 → 798
    GluR_Plant; Plant glutamate receptor domain; the type 2 periplasmic binding protein fold
    pfam00060
    Location:578 → 833
    Lig_chan; Ligand-gated ion channel
    cl10011
    Location:31 → 417
    Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily
Nucleotide Protein
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