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LOC4344999 germin-like protein 8-12 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4344999, updated on 6-Sep-2025
Gene symbol
LOC4344999
Gene description
germin-like protein 8-12
Locus tag
OSNPB_080231400
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OsJ_025435
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See LOC4344999 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (8046527..8047848, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (7994403..7995731, complement)

Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9271522 Neighboring gene uncharacterized LOC107281830 Neighboring gene uncharacterized LOC9266693 Neighboring gene uncharacterized LOC9267128

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables manganese ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
germin-like protein 8-12
Names
LOC_Os08g13440
P0461A06.15
putative germin protein type 1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001422504.1 → NP_001409433.1  germin-like protein 8-12 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    CB666437, CI016251, CI289136
    UniProtKB/Swiss-Prot
    A0A0P0XD47, Q6ZCR3
    UniProtKB/TrEMBL
    A2YSN2

  2. NM_001422505.1 → NP_001409434.1  germin-like protein 8-12 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    CB666437, CF309207, CI016251, CI289136

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

    Range
    8046527..8047848 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6ZCR3.1 GenPept UniProtKB/Swiss-Prot:Q6ZCR3

Gene LinkOut

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Molecular Biology Databases
Research Materials