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LOC4344508 endoglucanase 19-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4344508, updated on 3-Dec-2024
Gene symbol
LOC4344508
Gene description
endoglucanase 19-like
Locus tag
OSNPB_080114200
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4344508 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (773476..775342)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (763102..765375)

Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene U2 spliceosomal RNA Neighboring gene probable L-gulonolactone oxidase 4 Neighboring gene protein IQ-DOMAIN 17

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Modulating the root elongation by phosphate/nitrogen starvation in an OsGLU3 dependant way in rice. Zhang J, et al. Plant Signal Behav, 2012 Sep 1. PMID 22899054, Free PMC Article
  2. OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.). Zhang JW, et al. Mol Plant, 2012 Jan. PMID 21976713
  3. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. OsGLU3 is also dispensable for nitrogen starvation induced root elongation in rice.
    Title: Modulating the root elongation by phosphate/nitrogen starvation in an OsGLU3 dependant way in rice.
  2. GLU3 is a putative membrane-bound endo-1,4-beta-glucanase and is required for root cell elongation and division.
    Title: OsGLU3, a putative membrane-bound endo-1,4-beta-glucanase, is required for root cell elongation and division in rice (Oryza sativa L.).
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
endoglucanase 19
Names
Endo-1,4-beta glucanase 19
LOC_Os08g02220
P0427G12.14
putative endoglucanase 1 precursor (Endo-1,4-beta-glucanase) (Abscission cellulase 1)
NP_001409815.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001422886.1 → NP_001409815.1  endoglucanase 19 precursor

    Status: VALIDATED

    Source sequence(s)
    AK106851
    UniProtKB/Swiss-Prot
    A0A0P0XB73, Q0J8F3, Q6YXT7
    UniProtKB/TrEMBL
    A2YQM3

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

    Range
    773476..775342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6YXT7.1 GenPept UniProtKB/Swiss-Prot:Q6YXT7

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials