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LOC4344386 probable AMP deaminase [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4344386, updated on 6-Sep-2025
Gene symbol
LOC4344386
Gene description
probable AMP deaminase
Locus tag
OSNPB_070693500
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
AMPD; OsJ_25692
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See LOC4344386 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (29739594..29746288)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (29505386..29512077)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene uncharacterized LOC4344385 Neighboring gene protein trichome birefringence-like 28 Neighboring gene increased DNA methylation 1 Neighboring gene uncharacterized LOC4344388

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in AMP metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in IMP salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
probable AMP deaminase
Names
LOC_Os07g49270
P0034A04.129
putative AMP deaminase
NP_001409801.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001422872.1 → NP_001409801.1  probable AMP deaminase

    Status: VALIDATED

    Source sequence(s)
    AK064333, AK102007, AU092240, CB668055, CB668056, CI309572
    UniProtKB/Swiss-Prot
    Q0D3C9, Q84NP7
    UniProtKB/TrEMBL
    A2YQ78

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    29739594..29746288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q84NP7.1 GenPept UniProtKB/Swiss-Prot:Q84NP7

Gene LinkOut

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Molecular Biology Databases
Research Materials