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LOC4343960 UMP-CMP kinase 3-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4343960, updated on 16-Jun-2026
Gene symbol
LOC4343960
Gene description
UMP-CMP kinase 3-like
Locus tag
OSNPB_070624700
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
ura6
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See LOC4343960 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (26104843..26109000, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (25878468..25882554, complement)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136357460 Neighboring gene probable trehalose-phosphate phosphatase 3 Neighboring gene SKP1-like protein 11 Neighboring gene SKP1-like protein 13

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The electronic plant gene register. . Plant Physiol, 1999 Dec. PMID 10594126, Free PMC Article
  2. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  3. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UMP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' pyrimidine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in CDP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in UDP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
uMP-CMP kinase 3
Names
CK 3
Deoxycytidylate kinase 3
LOC_Os07g43170
P0524E08.133
UMP-CMP kinase 3
UMP/CMP kinase a
UMP/CMP kinase b
UMP/CMPK 3
Uridine monophosphate/cytidine monophosphate kinase 3
dCMP kinase 3
NP_001390110.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001403181.1 → NP_001390110.1  uMP-CMP kinase 3

    Status: VALIDATED

    Source sequence(s)
    CB665420, CI350504, CI443600, CI744935
    UniProtKB/Swiss-Prot
    A0A0P0X943, Q7XI40, Q9SE47, Q9SE48
    UniProtKB/TrEMBL
    A2XA82

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    26104843..26109000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7XI40.1 GenPept UniProtKB/Swiss-Prot:Q7XI40

Gene LinkOut

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Molecular Biology Databases
Research Materials