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LOC4343853 cytosolic sulfotransferase 12 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4343853, updated on 12-Jul-2024
Gene symbol
LOC4343853
Gene description
cytosolic sulfotransferase 12
Locus tag
OSNPB_070605800
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0493C06.9
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See LOC4343853 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (25070053..25071417)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (24845102..24846477)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene protein EGG APPARATUS-1 Neighboring gene protein MAIN-LIKE 1-like Neighboring gene uncharacterized LOC136357194 Neighboring gene cytosolic sulfotransferase 12

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sulfation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cytosolic sulfotransferase 12
Names
Os07g0605800
putative STF-1

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    25070053..25071417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015789994.3 → XP_015645480.1  cytosolic sulfotransferase 12

    UniProtKB/TrEMBL
    A0A0P0X8I5, A2YNI7, Q69RG0
    Conserved Domains (1) summary
    cl21551
    Location:31 → 339
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
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