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LOC4343756 BTB/POZ domain-containing protein At3g49900 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4343756, updated on 12-Jul-2024
Gene symbol
LOC4343756
Gene description
BTB/POZ domain-containing protein At3g49900
Locus tag
OSNPB_070587200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1047_C01.6
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See LOC4343756 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (24118494..24124169, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (23894049..23899956, complement)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4343754 Neighboring gene arabinosyltransferase RRA2 Neighboring gene eukaryotic peptide chain release factor subunit 1-3 Neighboring gene U-box domain-containing protein 4

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
BTB/POZ domain-containing protein At3g49900
Names
Os07g0587200
Os07g0587250

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    24118494..24124169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015790303.3 → XP_015645789.1  BTB/POZ domain-containing protein At3g49900

    UniProtKB/TrEMBL
    B8B841
    Conserved Domains (2) summary
    cl38908
    Location:90 → 174
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam03000
    Location:240 → 297
    NPH3; NPH3 family
Nucleotide Protein
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