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LOC4343735 chitin-inducible gibberellin-responsive protein 2-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4343735, updated on 6-Sep-2025
Gene symbol
LOC4343735
Gene description
chitin-inducible gibberellin-responsive protein 2-like
Locus tag
OSNPB_070583600
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
CIGR2; GIGR2; OsJ_24900; OJ1127_E01.113
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Try the new Transcripts and proteins table
See LOC4343735 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (23880026..23883574)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (23650530..23654054)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112939547 Neighboring gene uncharacterized LOC9266081 Neighboring gene uncharacterized LOC112939683 Neighboring gene WRKY transcription factor SUSIBA2 Neighboring gene putative yippee-like protein Os10g0369500

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The elicitor-responsive gene for a GRAS family protein, CIGR2, suppresses cell death in rice inoculated with rice blast fungus via activation of a heat shock transcription factor, OsHsf23. Tanabe S, et al. Biosci Biotechnol Biochem, 2016. PMID 26287768
  2. Identification and characterization of two new members of the GRAS gene family in rice responsive to N-acetylchitooligosaccharide elicitor. Day RB, et al. Biochim Biophys Acta, 2003 Feb 20. PMID 12591613
  3. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The elicitor-responsive gene for a GRAS family protein, CIGR2, suppresses cell death in rice inoculated with rice blast fungus via activation of a heat shock transcription factor, OsHsf23.
    Title: The elicitor-responsive gene for a GRAS family protein, CIGR2, suppresses cell death in rice inoculated with rice blast fungus via activation of a heat shock transcription factor, OsHsf23.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
chitin-inducible gibberellin-responsive protein 2
Names
LOC_Os07g39470

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001403126.1 → NP_001390055.1  chitin-inducible gibberellin-responsive protein 2

    Status: VALIDATED

    Source sequence(s)
    AK098890, AK122131, CI087656
    UniProtKB/Swiss-Prot
    Q0D544, Q8GVE1
    UniProtKB/TrEMBL
    A2YN28

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    23880026..23883574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GVE1.1 GenPept UniProtKB/Swiss-Prot:Q8GVE1

Gene LinkOut

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Research Materials