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LOC4342862 metal transporter Nramp1-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4342862, updated on 16-Jun-2026
Gene symbol
LOC4342862
Gene description
metal transporter Nramp1-like
Locus tag
OSNPB_070258400
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
Nramp1; OsNramp1; OsJ_23752; OJ1354_H07.109
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Try the new Transcripts and proteins table
See LOC4342862 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (9047200..9052036)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (8965999..8970870)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene alanine--tRNA ligase Neighboring gene uncharacterized LOC136357354 Neighboring gene BTB/POZ domain-containing protein At4g08455 Neighboring gene uncharacterized LOC9272173

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. OsNRAMP1 transporter contributes to cadmium and manganese uptake in rice. Chang JD, et al. Plant Cell Environ, 2020 Oct. PMID 32666540
  2. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Tiwari M, et al. Plant Cell Environ, 2014 Jan. PMID 23700971
  3. Role of the iron transporter OsNRAMP1 in cadmium uptake and accumulation in rice. Takahashi R, et al. Plant Signal Behav, 2011 Nov. PMID 22067109, Free PMC Article
  4. The OsNRAMP1 iron transporter is involved in Cd accumulation in rice. Takahashi R, et al. J Exp Bot, 2011 Oct. PMID 21697258, Free PMC Article
  5. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. OsNRAMP1 transporter contributes to cadmium and manganese uptake in rice.
    Title: OsNRAMP1 transporter contributes to cadmium and manganese uptake in rice.
  2. NRAMP plays a role in xylem mediated loading and enhanced accumulation of arsenic (As) and cadmium (Cd) in plants.
    Title: Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance.
  3. NRAMP1 is one of the crucial proteins responsible for higher Cd accumulation in rice.
    Title: Role of the iron transporter OsNRAMP1 in cadmium uptake and accumulation in rice.
  4. The OsNRAMP1(Os07g0258400) iron transporter is involved in Cd accumulation.
    Title: The OsNRAMP1 iron transporter is involved in Cd accumulation in rice.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
metal transporter Nramp1
Names
LOC_Os07g15460
rice Nramp1 protein(Natural-resistance-associated macrophage protein 1)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001403042.1 → NP_001389971.1  metal transporter Nramp1

    Status: VALIDATED

    Source sequence(s)
    AK121534, AU082598, CB637036, CB654944, CB654945, CI625211
    UniProtKB/Swiss-Prot
    A0A0P0X4X3, Q0D7E4, Q1W6C2, Q8GTY9
    UniProtKB/TrEMBL
    A2YK11

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    9047200..9052036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066311965.1 → XP_066168062.1  metal transporter Nramp1 isoform X2

    UniProtKB/TrEMBL
    Q41268

  2. XM_066311964.1 → XP_066168061.1  metal transporter Nramp1 isoform X1

    UniProtKB/TrEMBL
    Q41268
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0D7E4.1 GenPept UniProtKB/Swiss-Prot:Q0D7E4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials