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LOC4342403 187-kDa microtubule-associated protein AIR9 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4342403, updated on 16-Jun-2026
Gene symbol
LOC4342403
Gene description
187-kDa microtubule-associated protein AIR9
Locus tag
OSNPB_070148800
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 7
Exon count:
38
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (2542392..2557344)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (2530697..2545669)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene cytosolic sulfotransferase 12-like Neighboring gene flavonol 3-sulfotransferase-like Neighboring gene flavonol 3-sulfotransferase-like Neighboring gene photosystem I reaction center subunit psaK, chloroplastic Neighboring gene uncharacterized LOC9270813

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasmodesma IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
187-kDa microtubule-associated protein AIR9
Names
Os07g0148800
P0022E03.37
putative leucine rich repeat protein

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    2542392..2557344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015791887.3 → XP_015647373.1  187-kDa microtubule-associated protein AIR9 isoform X1

    UniProtKB/TrEMBL
    B8B7B1
    Conserved Domains (3) summary
    sd00033
    Location:251 → 272
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:297 → 332
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:317 → 372
    LRR_8; Leucine rich repeat

  2. XM_015791888.3 → XP_015647374.1  187-kDa microtubule-associated protein AIR9 isoform X2

    UniProtKB/TrEMBL
    B8B7B1
    Conserved Domains (2) summary
    sd00033
    Location:251 → 272
    LRR_RI; leucine-rich repeat [structural motif]
    cd21340
    Location:245 → 400
    PPP1R42; protein phosphatase 1 regulatory subunit 42
Nucleotide Protein
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