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LOC4342134 uncharacterized calcium-binding protein C800.10c [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4342134, updated on 16-Jun-2026
Gene symbol
LOC4342134
Gene description
uncharacterized calcium-binding protein C800.10c
Locus tag
OSNPB_060728600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (31884347..31892386)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (31013881..31021777)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4342131 Neighboring gene uncharacterized LOC4342133 Neighboring gene protein REVEILLE 1 Neighboring gene callose synthase 3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
uncharacterized calcium-binding protein C800.10c
Names
Os06g0728600
P0017G10.35
actin cytoskeleton-regulatory complex protein pan1
calcium-binding EF hand protein-like

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    31884347..31892386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015787412.3 → XP_015642898.1  uncharacterized calcium-binding protein C800.10c

    UniProtKB/TrEMBL
    A2YH71
    Conserved Domains (4) summary
    smart00027
    Location:372 → 465
    EH; Eps15 homology domain
    cd00052
    Location:5 → 71
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cd00890
    Location:562 → 685
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
    pfam13499
    Location:9 → 63
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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