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Fam169b family with sequence similarity 169, member B [ Mus musculus (house mouse) ]

Gene ID: 434197, updated on 26-Sep-2022

Summary

Official Symbol
Fam169bprovided by MGI
Official Full Name
family with sequence similarity 169, member Bprovided by MGI
Primary source
MGI:MGI:3644026
See related
Ensembl:ENSMUSG00000074071 AllianceGenome:MGI:3644026
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG434197
Summary
Orthologous to human FAM169B (family with sequence similarity 169 member B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in thymus adult (RPKM 18.2), spleen adult (RPKM 6.8) and 4 other tissues See more
Orthologs
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Genomic context

See Fam169b in Genome Data Viewer
Location:
7 C; 7
Exon count:
12
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (67923587..68012837)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (68273839..68363089)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene insulin-like growth factor I receptor Neighboring gene predicted gene, 51487 Neighboring gene pyroglutamyl-peptidase I-like Neighboring gene predicted gene 16157 Neighboring gene predicted gene 16158 Neighboring gene RIKEN cDNA 4933436H12 gene Neighboring gene predicted gene, 34549

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013811.3NP_001013833.1  protein FAM169B isoform 2

    See identical proteins and their annotated locations for NP_001013833.1

    Status: VALIDATED

    Source sequence(s)
    AC116515, AC125275
    Consensus CDS
    CCDS85317.1
    UniProtKB/Swiss-Prot
    Q8CHT6
    Related
    ENSMUSP00000146700.2, ENSMUST00000125685.9
  2. NM_001374636.1NP_001361565.1  protein FAM169B isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC116515, AC125275
    Consensus CDS
    CCDS90253.1
    UniProtKB/TrEMBL
    A0A1B0GRP6
    Related
    ENSMUSP00000147610.2, ENSMUST00000210558.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    67923587..68012837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006540973.3XP_006541036.1  protein FAM169B isoform X1

  2. XM_006540975.4XP_006541038.1  protein FAM169B isoform X2

  3. XM_030242739.2XP_030098599.1  protein FAM169B isoform X4

  4. XM_011250874.2XP_011249176.1  protein FAM169B isoform X3