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LOC4341945 DEAD-box ATP-dependent RNA helicase 35B [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4341945, updated on 6-Jun-2026
Gene symbol
LOC4341945
Gene description
DEAD-box ATP-dependent RNA helicase 35B
Locus tag
OSNPB_060697200
Gene type
protein coding
RefSeq status
INFERRED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OsJ_22496
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See LOC4341945 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (30030428..30033507)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (29163755..29166834)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9271654 Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 25 Neighboring gene uncharacterized LOC9271809 Neighboring gene DNA-directed RNA polymerases II, IV and V subunit 8B

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
dEAD-box ATP-dependent RNA helicase 35B
Names
LOC_Os06g48210
P0028E05.25
NP_001408754.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001421825.1 → NP_001408754.1  dEAD-box ATP-dependent RNA helicase 35B

    Status: INFERRED

    Source sequence(s)
    CP132240
    UniProtKB/Swiss-Prot
    A0A0P0X0D6, Q5Z6G5
    UniProtKB/TrEMBL
    A2YGL3

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    30030428..30033507
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5Z6G5.1 GenPept UniProtKB/Swiss-Prot:Q5Z6G5

Gene LinkOut

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Molecular Biology Databases
Research Materials