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LOC4341782 glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4341782, updated on 16-Jun-2026
Gene symbol
LOC4341782
Gene description
glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic
Locus tag
OSNPB_060666600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4341782 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (28466628..28470842, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (27601121..27605376, complement)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene VQ motif-containing protein 22 Neighboring gene RING-H2 finger protein ATL73 Neighboring gene uncharacterized LOC4341783 Neighboring gene uncharacterized LOC107281197

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic
Names
Os06g0666600
P0637D03.25
putative glyceraldehyde-3-phosphate dehydrogenase

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    28466628..28470842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015785543.3 → XP_015641029.1  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic

    UniProtKB/TrEMBL
    A2YFZ4, B7EZP9, Q655W2
    Conserved Domains (1) summary
    PLN02272
    Location:2 → 415
    PLN02272; glyceraldehyde-3-phosphate dehydrogenase
Nucleotide Protein
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