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LOC4341753 bZIP transcription factor RISBZ5-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4341753, updated on 6-Sep-2025
Gene symbol
LOC4341753
Gene description
bZIP transcription factor RISBZ5-like
Locus tag
OSNPB_060662200
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
BZIP52; RISBZ5; OsbZIP52; OsJ_22252
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Try the new Transcripts and proteins table
See LOC4341753 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (28164844..28167070, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (27299966..27302123, complement)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene V-type proton ATPase catalytic subunit A Neighboring gene uncharacterized LOC107281438 Neighboring gene pollen allergen Lol p 2-A Neighboring gene pollen allergen Lol p 2-A

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
bZIP transcription factor RISBZ5
Names
LOC_Os06g45140
OSJNBb0065C04.12
Rice seed bZIP5
bZIP transcription factor 52
basic leucine zipper 9

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001421687.1 → NP_001408616.1  bZIP transcription factor RISBZ5

    Status: VALIDATED

    Source sequence(s)
    CB653495, CB668694, CF334964, CI076635, CI168176, CI311372
    UniProtKB/Swiss-Prot
    Q654B3, Q9AVC9
    UniProtKB/TrEMBL
    B8B104, B8B108

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    28164844..28167070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q654B3.1 GenPept UniProtKB/Swiss-Prot:Q654B3

Gene LinkOut

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Molecular Biology Databases
Research Materials