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LOC4341259 berberine bridge enzyme-like Cyn d 4 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4341259, updated on 16-Jun-2026
Gene symbol
LOC4341259
Gene description
berberine bridge enzyme-like Cyn d 4
Locus tag
OSNPB_060549600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (21666141..21668029, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (20808189..20810053, complement)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136357025 Neighboring gene small nucleolar RNA R71 Neighboring gene berberine bridge enzyme-like Cyn d 4 Neighboring gene berberine bridge enzyme-like Cyn d 4 Neighboring gene uncharacterized LOC9271874

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
berberine bridge enzyme-like Cyn d 4
Names
Os06g0549600
P0659D09.11
berberine bridge enzyme-like 28
putative CPRD2
tetrahydrocannabinolic acid synthase

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    21666141..21668029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015786270.3 → XP_015641756.1  berberine bridge enzyme-like Cyn d 4

    UniProtKB/TrEMBL
    A0A0P0WXT8, B7EM94, Q5Z957
    Conserved Domains (3) summary
    COG0277
    Location:73 → 255
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:77 → 216
    FAD_binding_4; FAD binding domain
    pfam08031
    Location:460 → 520
    BBE; Berberine and berberine like
Nucleotide Protein
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