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LOC4341175 CMP-sialic acid transporter 1-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4341175, updated on 6-Jun-2026
Gene symbol
LOC4341175
Gene description
CMP-sialic acid transporter 1-like
Locus tag
OSNPB_060523400
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
CSTLP1; OsCSTLP1; OsJ_21524
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See LOC4341175 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (20193840..20200084, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (19338618..19344767, complement)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component SEC15B Neighboring gene uncharacterized LOC4341173 Neighboring gene uncharacterized LOC4341174 Neighboring gene uncharacterized LOC9268891 Neighboring gene protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyrimidine nucleotide-sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sialic acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
CMP-sialic acid transporter 1
Names
CMP-SA-Tr 1
CMP-Sia-Tr 1
CMP-sialic acid transporter-like protein 1
LOC_Os06g33210
OSJNBa0009J19.27
putative CMP-sialic acid transporter

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423997.1 → NP_001410926.1  CMP-sialic acid transporter 1 precursor

    Status: VALIDATED

    Source sequence(s)
    AK121890, CI082003, CI654256, CP132240
    UniProtKB/Swiss-Prot
    A0A0P0WXP8, B8B350, Q654D9

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    20193840..20200084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q654D9.1 GenPept UniProtKB/Swiss-Prot:Q654D9

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials