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LOC4340618 protein NRT1/ PTR FAMILY 5.8 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4340618, updated on 16-Jun-2026
Gene symbol
LOC4340618
Gene description
protein NRT1/ PTR FAMILY 5.8
Locus tag
OSNPB_060239500
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (7415707..7419217)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (7247542..7251124)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene metalloendoproteinase 2-MMP Neighboring gene protein NRT1/ PTR FAMILY 5.8 Neighboring gene O-fucosyltransferase 15 Neighboring gene uncharacterized LOC4340620

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
protein NRT1/ PTR FAMILY 5.8
Names
OSJNBa0052G07.25
OSJNBa0068B06.34
Os06g0239500
putative oligopeptide transporter

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    7415707..7419217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015785962.3 → XP_015641448.1  protein NRT1/ PTR FAMILY 5.8

    UniProtKB/TrEMBL
    A0A0N7KLU4, B7EA98, Q67VA7
    Conserved Domains (1) summary
    cl28910
    Location:16 → 535
    MFS; Major Facilitator Superfamily
Nucleotide Protein
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