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LOC4340409 G-protein coupled receptor 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4340409, updated on 16-Jun-2026
Gene symbol
LOC4340409
Gene description
G-protein coupled receptor 1
Locus tag
OSNPB_060199800
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
GPCR; OJ1147_D11.7
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See LOC4340409 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (5227262..5231562)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (5060620..5065029)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107278582 Neighboring gene phosphopantothenoylcysteine decarboxylase-like Neighboring gene uncharacterized LOC4340413 Neighboring gene uncharacterized LOC4340414

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
G-protein coupled receptor 1
Names
B1172G12.29
G protein coupled receptor-related-like
G-protein-coupled receptor
Os06g0199800

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    5227262..5231562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015786034.3 → XP_015641520.1  G-protein coupled receptor 1

    UniProtKB/TrEMBL
    A0A0P0WU91, B7F4B1, B8B3R3, E7EEJ6, Q69K53
    Conserved Domains (2) summary
    cd14964
    Location:21 → 45
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:20 → 274
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
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