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LOC4340378 uncharacterized LOC4340378 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4340378, updated on 16-Jun-2026
Gene symbol
LOC4340378
Gene description
uncharacterized LOC4340378
Locus tag
OSNPB_060192900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (4851894..4854931)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (4686962..4690274)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome regulatory subunit 7A-like Neighboring gene RING-H2 finger protein ATL3 Neighboring gene ubiquitin-conjugating enzyme E2 34 Neighboring gene pectinesterase

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-nucleotidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
uncharacterized protein LOC4340378
Names
Os06g0192900
P0698A06.20

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    4851894..4854931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015789056.3 → XP_015644542.1  uncharacterized protein LOC4340378

    UniProtKB/TrEMBL
    A2YA80, Q69Y57
    Conserved Domains (1) summary
    cl21460
    Location:154 → 322
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
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