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LOC4340258 ribonucleoside-diphosphate reductase large subunit [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4340258, updated on 16-Jun-2026
Gene symbol
LOC4340258
Gene description
ribonucleoside-diphosphate reductase large subunit
Locus tag
OSNPB_060168600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
RnrL1
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See LOC4340258 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (3612440..3617346, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (3449699..3454774, complement)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase I subunit rpa43 Neighboring gene syntaxin-132 Neighboring gene 36.4 kDa proline-rich protein Neighboring gene serine/threonine-protein kinase PBL34

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Rice virescent3 and stripe1 encoding the large and small subunits of ribonucleotide reductase are required for chloroplast biogenesis during early leaf development. Yoo SC, et al. Plant Physiol, 2009 May. PMID 19297585, Free PMC Article
  2. The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein α -Subunit. Biswal AK, et al. Proteomics, 2019 May. PMID 30866160
  3. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoside-diphosphate reductase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ribonucleoside-diphosphate reductase large subunit
Names
OSJNBa0033B09.19
Os06g0168600
P0680A03.40
putative ribonucleotide reductase
ribonucleotide diphosphate reductase large subunit 1

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    3612440..3617346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015785565.3 → XP_015641051.1  ribonucleoside-diphosphate reductase large subunit

    UniProtKB/TrEMBL
    A0A0P0WTF8, B2M117, Q5VRF5
    Conserved Domains (1) summary
    PLN02437
    Location:1 → 814
    PLN02437; ribonucleoside--diphosphate reductase large subunit
Nucleotide Protein
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