U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4339247 secretory carrier-associated membrane protein 3-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4339247, updated on 30-May-2026
Gene symbol
LOC4339247
Gene description
secretory carrier-associated membrane protein 3-like
Locus tag
OSNPB_050503000
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
SCAMP3; OsJ_19111
Try the new Gene page
Try the new Transcripts and proteins table
See LOC4339247 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (24877303..24882912, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (24762182..24767785, complement)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene H/ACA ribonucleoprotein complex non-core subunit NAF1 Neighboring gene uncharacterized LOC136356519 Neighboring gene uncharacterized LOC107277244 Neighboring gene sulfite reductase [ferredoxin], chloroplastic

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in recycling endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
secretory carrier-associated membrane protein 3
Names
LOC_Os05g42330
OSJNBa0017K09.16
OSJNBb0048K05.1
Secretory carrier membrane protein 3

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001402596.1 → NP_001389525.1  secretory carrier-associated membrane protein 3

    Status: VALIDATED

    Source sequence(s)
    AK104049, AU065315, AU184478, CF327717, CI665184, CP132239
    UniProtKB/Swiss-Prot
    A3B5L5, B7EVJ1, Q60EA5
    UniProtKB/TrEMBL
    B8AZR2

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    24877303..24882912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066310278.1 → XP_066166375.1  secretory carrier-associated membrane protein 3 isoform X1

    UniProtKB/TrEMBL
    B8AZR2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q60EA5.1 GenPept UniProtKB/Swiss-Prot:Q60EA5

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials