U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SNAT1 serotonin N-acetyltransferase 1, chloroplastic-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4339123, updated on 6-Jun-2026
Gene symbol
SNAT1
Gene description
serotonin N-acetyltransferase 1, chloroplastic-like
Locus tag
OSNPB_050481000
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
NSI; SNAT; GNAT5; OsSNAT1; OsJ_18949; OsJ_018182
Try the new Gene page
Try the new Transcripts and proteins table
See SNAT1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (23757129..23761300)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (23642764..23646674)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107281127 Neighboring gene V-type proton ATPase subunit E2 Neighboring gene uncharacterized LOC136351190 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g06840 Neighboring gene B3 domain-containing protein Os05g0481400-like Neighboring gene uncharacterized LOC136356506 Neighboring gene uncharacterized LOC107281111

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Simultaneous Suppression of Two Distinct Serotonin N-Acetyltransferase Isogenes by RNA Interference Leads to Severe Decreases in Melatonin and Accelerated Seed Deterioration in Rice.
    Title: Simultaneous Suppression of Two Distinct Serotonin N-Acetyltransferase Isogenes by RNA Interference Leads to Severe Decreases in Melatonin and Accelerated Seed Deterioration in Rice.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
serotonin N-acetyltransferase 1, chloroplastic
Names
LOC_Os05g40260
Nuclear shuttle protein-interacting protein homolog
OSJNBa0095J22.4
acetyltransferase NSI homolog
probable acetyltransferase NSI
NP_001389503.1

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001402574.1 → NP_001389503.1  serotonin N-acetyltransferase 1, chloroplastic

    Status: VALIDATED

    Source sequence(s)
    AK059369, AU162147, CP132239
    UniProtKB/Swiss-Prot
    A2Y5T7, A3B560, B7E3M6, B8AZA9, Q0DHA1, Q5KQI6

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    23757129..23761300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5KQI6.1 GenPept UniProtKB/Swiss-Prot:Q5KQI6

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials