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LOC4338981 uracil phosphoribosyltransferase [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4338981, updated on 12-Jul-2024
Gene symbol
LOC4338981
Gene description
uracil phosphoribosyltransferase
Locus tag
OSNPB_050455700
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (22501398..22505858, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (22387966..22392455, complement)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene delta-1-pyrroline-5-carboxylate synthase 1-like Neighboring gene PRA1 family protein A1 Neighboring gene uncharacterized LOC4338982 Neighboring gene pentatricopeptide repeat-containing protein At2g27610

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables uracil phosphoribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in uracil salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
uracil phosphoribosyltransferase
Names
Os05g0455700

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    22501398..22505858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015784842.3 → XP_015640328.1  uracil phosphoribosyltransferase

    UniProtKB/TrEMBL
    A0A0P0WNA7, B9FJD7, Q60EM2
    Conserved Domains (1) summary
    PLN02541
    Location:59 → 301
    PLN02541; uracil phosphoribosyltransferase
Nucleotide Protein
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