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LOC4337878 GDSL esterase/lipase At1g09390 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4337878, updated on 16-Jun-2026
Gene symbol
LOC4337878
Gene description
GDSL esterase/lipase At1g09390
Locus tag
OSNPB_050159200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (3511425..3515482, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (3492655..3496763, complement)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase UPL6 Neighboring gene Golgi apparatus membrane protein-like protein ECHIDNA Neighboring gene GDSL esterase/lipase At1g09390 Neighboring gene fasciclin-like arabinogalactan protein 8

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
GDSL esterase/lipase At1g09390
Names
Os05g0159200

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    3511425..3515482 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015785288.3 → XP_015640774.1  GDSL esterase/lipase At1g09390

    UniProtKB/TrEMBL
    A2Y0M6, Q5W722
    Conserved Domains (1) summary
    cd01837
    Location:101 → 408
    SGNH_plant_lipase_like; a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its ...
Nucleotide Protein
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