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LOC4337435 cysteine protease ATG4B-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4337435, updated on 6-Jun-2026
Gene symbol
LOC4337435
Gene description
cysteine protease ATG4B-like
Locus tag
OSNPB_040682000
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
APG4B; ATG4B
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Try the new Transcripts and proteins table
See LOC4337435 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (35336600..35340042, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (34816656..34820101, complement)

Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA-binding domain-containing protein 4-like Neighboring gene glucan endo-1,3-beta-glucosidase-like Neighboring gene anamorsin homolog 2-like Neighboring gene elicitor-responsive protein 3-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-phosphatidylethanolamide deconjugating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cysteine protease ATG4B
Names
LOC_Os04g58560
OSJNBa0032F06.13
autophagy-related protein 4 homolog B
NP_001406919.1
NP_001406920.1
XP_066165303.1
XP_066165304.1
XP_066165305.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419990.1 → NP_001406919.1  cysteine protease ATG4B isoform 1

    Status: VALIDATED

    Source sequence(s)
    AK069012, CI303200, CP132238
    UniProtKB/Swiss-Prot
    A2XZ28, B7EFR3, Q2XPP4, Q7XPW8

  2. NM_001419991.1 → NP_001406920.1  cysteine protease ATG4B isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK069012, AU225436, CI303200, CP132238
    UniProtKB/Swiss-Prot
    A2XZ28, Q2XPP4

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

    Range
    35336600..35340042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066309207.1 → XP_066165304.1  cysteine protease ATG4B isoform X2

    UniProtKB/Swiss-Prot
    A2XZ28, Q2XPP4

  2. XM_066309208.1 → XP_066165305.1  cysteine protease ATG4B isoform X2

    UniProtKB/Swiss-Prot
    A2XZ28, Q2XPP4

  3. XM_066309206.1 → XP_066165303.1  cysteine protease ATG4B isoform X1

    UniProtKB/Swiss-Prot
    A2XZ28, B7EFR3, Q2XPP4, Q7XPW8

RNA

  1. XR_010740500.1 RNA Sequence

  2. XR_010740499.1 RNA Sequence

  3. XR_010740498.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7XPW8.1 GenPept UniProtKB/Swiss-Prot:Q7XPW8

Gene LinkOut

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Molecular Biology Databases
Research Materials