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LOC4337351 oryzain beta chain-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4337351, updated on 6-Sep-2025
Gene symbol
LOC4337351
Gene description
oryzain beta chain-like
Locus tag
OSNPB_040670200
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4337351 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (34693170..34696616, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (34173350..34176726, complement)

Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene methylthioribose kinase 2-like Neighboring gene reticulon-like protein B11 Neighboring gene uncharacterized protein At4g06744 Neighboring gene OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 7 Neighboring gene cysteine protease 1-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Molecular cloning and gibberellin-induced expression of multiple cysteine proteinases of rice seeds (oryzains). Watanabe H, et al. J Biol Chem, 1991 Sep 5. PMID 1885617
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
oryzain beta chain
Names
H0818H01.14
LOC_Os04g57440
OSJNBa0043A12.28
NP_001389384.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001402455.1 → NP_001389384.1  oryzain beta chain precursor

    Status: VALIDATED

    Source sequence(s)
    AK109371, CI070300, CI290840
    UniProtKB/Swiss-Prot
    B7F253, P25777, Q0J962, Q259Q5, Q7XR57, Q8S4X9
    UniProtKB/TrEMBL
    A0A0P0WGF4, A2XYT1

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

    Range
    34693170..34696616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P25777.2 GenPept UniProtKB/Swiss-Prot:P25777

Gene LinkOut

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Molecular Biology Databases
Research Materials