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LOC4337291 26S proteasome non-ATPase regulatory subunit 7 homolog A [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4337291, updated on 3-Dec-2024
Gene symbol
LOC4337291
Gene description
26S proteasome non-ATPase regulatory subunit 7 homolog A
Locus tag
OSNPB_040661900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OsRPN8
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See LOC4337291 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (34297484..34301086)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (33777471..33781129)

Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4337289 Neighboring gene mediator of RNA polymerase II transcription subunit 7a Neighboring gene uncharacterized LOC4337292 Neighboring gene uncharacterized LOC4337293

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
26S proteasome non-ATPase regulatory subunit 7 homolog A
Names
26S proteasome regulatory particle non-ATPase subunit8

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

    Range
    34297484..34301086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015781703.3 → XP_015637189.2  26S proteasome non-ATPase regulatory subunit 7 homolog A

    UniProtKB/TrEMBL
    A2XYK8, A3AYA8, Q8W424
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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