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LOC4336511 peroxisomal membrane protein 11-4-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4336511, updated on 17-Jul-2024
Gene symbol
LOC4336511
Gene description
peroxisomal membrane protein 11-4-like
Locus tag
OSNPB_040534600
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
PEX11-4; OsPEX11-4; OsJ_014940
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See LOC4336511 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (27223920..27225195)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (26720014..26721344)

Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene vesicle-associated protein 1-2 Neighboring gene uncharacterized LOC4336510 Neighboring gene uncharacterized LOC136356375 Neighboring gene uncharacterized LOC4336512

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in peroxisome fission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
peroxisomal membrane protein 11-4
Names
LOC_Os04g45210
OSJNBb0020O11.14
Peroxin-11-4

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419712.1 → NP_001406641.1  peroxisomal membrane protein 11-4

    Status: VALIDATED

    Source sequence(s)
    AK287635
    UniProtKB/Swiss-Prot
    A2XVW1, A3AVW8, B7EMS1, Q01IH3, Q7XU74

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

    Range
    27223920..27225195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7XU74.2 GenPept UniProtKB/Swiss-Prot:Q7XU74

Gene LinkOut

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Research Materials