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LOC4335473 large ribosomal subunit protein mL101 (rPPR4) [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4335473, updated on 16-Jun-2026
Gene symbol
LOC4335473
Gene description
large ribosomal subunit protein mL101 (rPPR4)
Locus tag
OSNPB_040320200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (14952433..14955963, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (14718532..14722117, complement)

Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene sister chromatid cohesion protein PDS5 homolog C Neighboring gene 7-hydroxymethyl chlorophyll a reductase, chloroplastic-like Neighboring gene uncharacterized LOC136356110 Neighboring gene 7-deoxyloganetin glucosyltransferase

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
large ribosomal subunit protein mL101 (rPPR4)
Names
Os04g0320200
pentatricopeptide repeat-containing protein At1g60770

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

    Range
    14952433..14955963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015781469.2 → XP_015636955.1  large ribosomal subunit protein mL101 (rPPR4)

    UniProtKB/TrEMBL
    A0A0P0W8L1, A2XFN0, B7F4Q5, Q7XTG6
    Conserved Domains (4) summary
    sd00004
    Location:121 → 148
    PPR; PPR repeat [structural motif]
    pfam13812
    Location:175 → 237
    PPR_3; Pentatricopeptide repeat domain
    pfam01535
    Location:121 → 150
    PPR; PPR repeat
    pfam13041
    Location:156 → 200
    PPR_2; PPR repeat family
Nucleotide Protein
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