U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4334655 probable acylpyruvase FAHD2, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4334655, updated on 12-Jul-2024
Gene symbol
LOC4334655
Gene description
probable acylpyruvase FAHD2, mitochondrial
Locus tag
OSNPB_030829000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Try the new Gene page
Try the new Transcripts and proteins table
See LOC4334655 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (35789822..35793058, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (34817166..34820387, complement)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 Neighboring gene NAC domain-containing protein 72-like Neighboring gene uncharacterized LOC4334656 Neighboring gene uncharacterized LOC4334657

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylpyruvate hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
probable acylpyruvase FAHD2, mitochondrial
Names
Os03g0829000
acylpyruvase FAHD1, mitochondrial

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    35789822..35793058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015772806.3 → XP_015628292.1  probable acylpyruvase FAHD2, mitochondrial

    UniProtKB/Swiss-Prot
    Q10B63, Q850X1, Q8SAY6
    UniProtKB/TrEMBL
    A2XNL0
    Conserved Domains (1) summary
    COG0179
    Location:14 → 210
    MhpD; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport and catabolism]

  2. XM_015772805.3 → XP_015628291.1  probable acylpyruvase FAHD2, mitochondrial

    UniProtKB/Swiss-Prot
    Q10B63, Q850X1, Q8SAY6
    UniProtKB/TrEMBL
    A2XNL0
    Conserved Domains (1) summary
    COG0179
    Location:14 → 210
    MhpD; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport and catabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials