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Creg1 cellular repressor of E1A-stimulated genes 1 [ Mus musculus (house mouse) ]

Gene ID: 433375, updated on 22-Jan-2023

Summary

Official Symbol
Creg1provided by MGI
Official Full Name
cellular repressor of E1A-stimulated genes 1provided by MGI
Primary source
MGI:MGI:1344382
See related
Ensembl:ENSMUSG00000040713 AllianceGenome:MGI:1344382
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Creg
Summary
Acts upstream of or within regulation of transcription, DNA-templated. Part of transcription regulator complex. Is expressed in liver and ureter. Orthologous to human CREG1 (cellular repressor of E1A stimulated genes 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in placenta adult (RPKM 225.0), liver adult (RPKM 174.7) and 21 other tissues See more
Orthologs
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Genomic context

See Creg1 in Genome Data Viewer
Location:
1; 1 H2.3
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (165591327..165602878)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (165763758..165775309)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene RCSD domain containing 1 Neighboring gene predicted gene, 51752 Neighboring gene CD247 antigen Neighboring gene predicted gene, 23402 Neighboring gene predicted gene, 32999

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables insulin-like growth factor receptor binding ISO
Inferred from Sequence Orthology
more info
PubMed 
enables transcription factor binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in endosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in lysosome IDA
Inferred from Direct Assay
more info
PubMed 
part_of transcription regulator complex IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011804.3NP_035934.1  protein CREG1 precursor

    See identical proteins and their annotated locations for NP_035934.1

    Status: VALIDATED

    Source sequence(s)
    AC124587, AW495378
    Consensus CDS
    CCDS35759.1
    UniProtKB/Swiss-Prot
    O88668, Q8C3I1
    UniProtKB/TrEMBL
    A0A8C6H8H2
    Related
    ENSMUSP00000107060.4, ENSMUST00000111432.10
    Conserved Domains (1) summary
    pfam13883
    Location:50216
    Pyrid_oxidase_2; Pyridoxamine 5'-phosphate oxidase

RNA

  1. NR_149310.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124587, AK150006, AW495378
    Related
    ENSMUST00000140769.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    165591327..165602878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)