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Creg1 cellular repressor of E1A-stimulated genes 1 [ Mus musculus (house mouse) ]

Gene ID: 433375, updated on 12-May-2024

Summary

Official Symbol
Creg1provided by MGI
Official Full Name
cellular repressor of E1A-stimulated genes 1provided by MGI
Primary source
MGI:MGI:1344382
See related
Ensembl:ENSMUSG00000040713 AllianceGenome:MGI:1344382
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Creg
Summary
Acts upstream of or within regulation of transcription, DNA-templated. Part of transcription regulator complex. Is expressed in liver and ureter. Orthologous to human CREG1 (cellular repressor of E1A stimulated genes 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in placenta adult (RPKM 225.0), liver adult (RPKM 174.7) and 21 other tissues See more
Orthologs
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Genomic context

See Creg1 in Genome Data Viewer
Location:
1 H2.3; 1 73.11 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (165591327..165602878)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (165763758..165775309)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_02911 Neighboring gene STARR-positive B cell enhancer mm9_chr1:167591001-167591302 Neighboring gene RCSD domain containing 1 Neighboring gene STARR-positive B cell enhancer ABC_E1571 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:167636283-167636436 Neighboring gene STARR-positive B cell enhancer ABC_E11104 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:167648574-167648683 Neighboring gene predicted gene, 51752 Neighboring gene STARR-positive B cell enhancer ABC_E1572 Neighboring gene STARR-positive B cell enhancer ABC_E4374 Neighboring gene STARR-positive B cell enhancer ABC_E7771 Neighboring gene STARR-positive B cell enhancer ABC_E9064 Neighboring gene CD247 antigen Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:167732146-167732347 Neighboring gene predicted gene, 23402 Neighboring gene STARR-seq mESC enhancer starr_02912 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:167775596-167775783 Neighboring gene predicted gene, 32999

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011804.3NP_035934.1  protein CREG1 precursor

    See identical proteins and their annotated locations for NP_035934.1

    Status: VALIDATED

    Source sequence(s)
    AC124587, AW495378
    Consensus CDS
    CCDS35759.1
    UniProtKB/Swiss-Prot
    O88668, Q3UNP8, Q8C3I1
    Related
    ENSMUSP00000107060.4, ENSMUST00000111432.10
    Conserved Domains (1) summary
    pfam13883
    Location:50216
    Pyrid_oxidase_2; Pyridoxamine 5'-phosphate oxidase

RNA

  1. NR_149310.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124587, AK150006, AW495378
    Related
    ENSMUST00000140769.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    165591327..165602878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)