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Rpl13a-ps1 ribosomal protein 13A, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 433251, updated on 17-Aug-2024

Summary

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Official Symbol
Rpl13a-ps1provided by MGI
Official Full Name
ribosomal protein 13A, pseudogene 1provided by MGI
Primary source
MGI:MGI:3648883
See related
Ensembl:ENSMUSG00000062083 AllianceGenome:MGI:3648883
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm5520; EG433251
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Genomic context

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See Rpl13a-ps1 in Genome Data Viewer
Location:
19 D1; 19 44.92 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (50018539..50019195, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (50030100..50030756, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L19 pseudogene Neighboring gene siah E3 ubiquitin protein ligase 1, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_46394 Neighboring gene STARR-seq mESC enhancer starr_46395 Neighboring gene STARR-seq mESC enhancer starr_46396 Neighboring gene STARR-seq mESC enhancer starr_46397 Neighboring gene STARR-seq mESC enhancer starr_46398 Neighboring gene sortilin-related VPS10 domain containing receptor 1 Neighboring gene STARR-seq mESC enhancer starr_46399 Neighboring gene STARR-seq mESC enhancer starr_46400 Neighboring gene STARR-seq mESC enhancer starr_46401 Neighboring gene STARR-seq mESC enhancer starr_46402 Neighboring gene predicted gene, 26629 Neighboring gene STARR-seq mESC enhancer starr_46403 Neighboring gene predicted gene, 25644

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • predicted pseudogene 5520
  • ribosomal protein L13a pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007435.1 

    Range
    101..757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    50018539..50019195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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