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LOC4332406 probable protein phosphatase 2C 31 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4332406, updated on 16-Jul-2024
Gene symbol
LOC4332406
Gene description
probable protein phosphatase 2C 31
Locus tag
OSNPB_030275100
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OsPP2C31; OsJ_009919
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See LOC4332406 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (9335773..9339302)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (9284693..9288790)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4332404 Neighboring gene receptor-like cytoplasmic kinase 176 Neighboring gene E3 ubiquitin-protein ligase XB3-like Neighboring gene uncharacterized LOC4332408

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
probable protein phosphatase 2C 31
Names
LOC_Os03g16760
NP_001404428.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001417499.1 → NP_001404428.1  probable protein phosphatase 2C 31

    Status: VALIDATED

    Source sequence(s)
    AK107250, AK107380, CI191065
    UniProtKB/Swiss-Prot
    A0A0P0VW30, Q10NB9

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    9335773..9339302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q10NB9.1 GenPept UniProtKB/Swiss-Prot:Q10NB9

Gene LinkOut

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Molecular Biology Databases
Research Materials