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LOC4332349 coronatine-insensitive protein homolog 2-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4332349, updated on 31-May-2026
Gene symbol
LOC4332349
Gene description
coronatine-insensitive protein homolog 2-like
Locus tag
OSNPB_030265500
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
COI2; OsCOI2; OsJ_10247; OJ1012B02.14
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See LOC4332349 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (8812001..8817203)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (8761805..8766964)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene peroxisomal nicotinamide adenine dinucleotide carrier Neighboring gene large ribosomal subunit protein uL4c Neighboring gene serine/arginine-rich splicing factor SR45a Neighboring gene uncharacterized LOC4332351

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Transcriptomic and metabolomic reveal OsCOI2 as the jasmonate-receptor master switch in rice root. Cheaib M, et al. PLoS One, 2024. PMID 39466751, Free PMC Article
  2. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  3. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Transcriptomic and metabolomic reveal OsCOI2 as the jasmonate-receptor master switch in rice root.
    Title: Transcriptomic and metabolomic reveal OsCOI2 as the jasmonate-receptor master switch in rice root.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
coronatine-insensitive protein homolog 2
Names
LOC_Os03g15880

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001417468.1 → NP_001404397.1  coronatine-insensitive protein homolog 2

    Status: VALIDATED

    Source sequence(s)
    AK066392, AK100694, CB637632, CB685023, CI136954, CI594614, CP132237, D39881
    UniProtKB/Swiss-Prot
    A0A0P0VW20, A2XEV1, Q84QA7

  2. NM_001417469.1 → NP_001404398.1  coronatine-insensitive protein homolog 2

    Status: VALIDATED

    Source sequence(s)
    AK066392, AK100694, CB637632, CB685023, CI136954, CI594614, CI597661, CP132237, D39881
    UniProtKB/Swiss-Prot
    A0A0P0VW20, A2XEV1, Q84QA7

  3. NM_001417470.1 → NP_001404399.1  coronatine-insensitive protein homolog 2

    Status: VALIDATED

    Source sequence(s)
    AK066392, AK100694, CB637632, CB685023, CI136954, CI586801, CI594614, CP132237, D39881
    UniProtKB/Swiss-Prot
    A0A0P0VW20, A2XEV1, Q84QA7

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    8812001..8817203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q84QA7.1 GenPept UniProtKB/Swiss-Prot:Q84QA7

Gene LinkOut

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Molecular Biology Databases
Research Materials