U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4332084 beta-hexosaminidase 2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4332084, updated on 16-Jun-2026
Gene symbol
LOC4332084
Gene description
beta-hexosaminidase 2
Locus tag
OSNPB_030219400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Try the new Gene page
Try the new Transcripts and proteins table
See LOC4332084 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (6327746..6330228, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (6280233..6282733, complement)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene superoxide dismutase [Cu-Zn] 2 Neighboring gene tubulin alpha-2 chain Neighboring gene protein BOLA1, chloroplastic Neighboring gene transfer RNA threonine (anticodon UGU)

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
beta-hexosaminidase 2
Names
Os03g0219400

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    6327746..6330228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015776522.3 → XP_015632008.1  beta-hexosaminidase 2

    UniProtKB/TrEMBL
    B7EQT0, Q0DTX3, Q10PW1
    Conserved Domains (2) summary
    cd06562
    Location:192 → 583
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    pfam14845
    Location:48 → 165
    Glycohydro_20b2; beta-acetyl hexosaminidase like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials