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LOC4331979 dual-specificity RNA methyltransferase RlmN [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4331979, updated on 16-Jun-2026
Gene symbol
LOC4331979
Gene description
dual-specificity RNA methyltransferase RlmN
Locus tag
OSNPB_030202300
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4331979 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (5400120..5404459, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (5352941..5357309, complement)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene adenylyl-sulfate kinase 3 Neighboring gene mitochondrial outer membrane protein porin 5-like Neighboring gene uncharacterized LOC136355779 Neighboring gene uncharacterized LOC136355906

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA base methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
dual-specificity RNA methyltransferase RlmN
Names
Os03g0202300

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001417319.1 → NP_001404248.1  dual-specificity RNA methyltransferase RlmN

    Status: VALIDATED

    Source sequence(s)
    AK071317, CB672474
    UniProtKB/TrEMBL
    B8AQH6, Q10QB5

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    5400120..5404459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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