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LOC4331811 elongation factor 1-alpha-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4331811, updated on 16-Jun-2026
Gene symbol
LOC4331811
Gene description
elongation factor 1-alpha-like
Locus tag
OSNPB_030177500
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4331811 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (4110998..4113859)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (4099914..4103020)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase SPL2 Neighboring gene elongation factor 1-alpha-like Neighboring gene elongation factor 1-alpha-like Neighboring gene elongation factor 1-alpha-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
elongation factor 1-alpha-like
Names
Os03g0177500
elongation factor 1-alpha

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    4110998..4113859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015774251.3 → XP_015629737.1  elongation factor 1-alpha-like

    UniProtKB/Swiss-Prot
    A3AEP9, O49831, O50075, O64937, Q10QZ6
    UniProtKB/TrEMBL
    A0A0N7KGP4, A0A1L2JKK1, B8APM5
    Conserved Domains (1) summary
    PTZ00141
    Location:1 → 436
    PTZ00141; elongation factor 1- alpha; Provisional
Nucleotide Protein
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