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LOC4331337 vacuolar protein sorting-associated protein 24 homolog 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4331337, updated on 16-Jun-2026
Gene symbol
LOC4331337
Gene description
vacuolar protein sorting-associated protein 24 homolog 1
Locus tag
OSNPB_030108400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (505132..506928)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (497739..499562)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9271783 Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 32 Neighboring gene very-long-chain aldehyde decarbonylase GL1-10-like Neighboring gene DEAD-box ATP-dependent RNA helicase 50-like Neighboring gene uncharacterized LOC4331340

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
vacuolar protein sorting-associated protein 24 homolog 1
Names
Os03g0108400

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    505132..506928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015772910.3 → XP_015628396.1  vacuolar protein sorting-associated protein 24 homolog 1

    UniProtKB/TrEMBL
    B9FAD1, Q10SX2
    Conserved Domains (1) summary
    cl21588
    Location:20 → 185
    Snf7
Nucleotide Protein
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