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LOC4331258 outer envelope pore protein 21, chloroplastic-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4331258, updated on 16-Jul-2024
Gene symbol
LOC4331258
Gene description
outer envelope pore protein 21, chloroplastic-like
Locus tag
OSNPB_020832200
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OEP21; OsJ_09004; OJ1149_C12.21
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See LOC4331258 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (36283682..36286659, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (35784799..35787815, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene probable phospholipase A2 homolog 1 Neighboring gene homoserine kinase Neighboring gene calcium-dependent protein kinase 6-like Neighboring gene RING-H2 finger protein ATL80 Neighboring gene callose synthase 3 Neighboring gene uncharacterized LOC4331261

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated monoatomic anion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
outer envelope pore protein 21, chloroplastic
Names
Chloroplastic outer envelope pore protein of 21 kDa
LOC_Os02g58550
putative chloroplast channel forming outer membrane protein

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423882.1 → NP_001410811.1  outer envelope pore protein 21, chloroplastic

    Status: VALIDATED

    Source sequence(s)
    CF308299, CI421683
    UniProtKB/Swiss-Prot
    A0A0P0VRP2, Q6K965

  2. NM_001423883.1 → NP_001410812.1  outer envelope pore protein 21, chloroplastic

    Status: VALIDATED

    Source sequence(s)
    AK108268, CF308299, CI421683
    UniProtKB/Swiss-Prot
    A0A0P0VRP2, Q6K965

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    36283682..36286659 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6K965.1 GenPept UniProtKB/Swiss-Prot:Q6K965

Gene LinkOut

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Molecular Biology Databases
Research Materials