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LOC4330890 DNA-3-methyladenine glycosylase [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330890, updated on 16-Jun-2026
Gene symbol
LOC4330890
Gene description
DNA-3-methyladenine glycosylase
Locus tag
OSNPB_020774500
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1448_G06.11
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See LOC4330890 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (33190703..33192911, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (32695342..32697587, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene heat shock 70 kDa protein, mitochondrial Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene uncharacterized LOC112937807 Neighboring gene metal tolerance protein 3-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alkylbase DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
DNA-3-methyladenine glycosylase
Names
Os02g0774500
putative DNA-3-methyladenine glycosylase

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    33190703..33192911 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015768767.3 → XP_015624253.1  DNA-3-methyladenine glycosylase

    UniProtKB/TrEMBL
    A2XA54, B7F328, Q0DX49
    Conserved Domains (1) summary
    TIGR00567
    Location:92 → 277
    3mg; DNA-3-methyladenine glycosylase
Nucleotide Protein
Heading Accession and Version

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