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LOC4330839 putative mannan endo-1,4-beta-mannosidase 9 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330839, updated on 21-Dec-2023

Summary

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Gene symbol
LOC4330839
Gene description
putative mannan endo-1,4-beta-mannosidase 9
Locus tag
OSNPB_020766900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
MAN9; OsMANP; OsMan9; OJ1004_A11.22
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (32283950..32285647, complement)

Chromosome 2 - NC_029257.1Genomic Context describing neighboring genes Neighboring gene bZIP transcription factor 23-like Neighboring gene uncharacterized LOC107280099 Neighboring gene uncharacterized LOC4330840 Neighboring gene THO complex subunit 5A Neighboring gene uncharacterized LOC4330842

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029257.1 Chromosome 2 Reference IRGSP-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in organic substance metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative mannan endo-1,4-beta-mannosidase 9
Names
Beta-mannanase 9
Endo-beta-1,4-mannanase 9
LOC_Os02g52800
P0539D10.41
putative (1-4)-beta-mannan endohydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029257.1 Reference IRGSP-1.0 Primary Assembly

    Range
    32283950..32285647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015769478.1 → XP_015624964.1  putative mannan endo-1,4-beta-mannosidase 9

    UniProtKB/Swiss-Prot
    Q6Z310
    UniProtKB/TrEMBL
    A2X9Z7, A3ABP6
    Conserved Domains (1) summary
    COG3934
    Location:44 → 368
    COG3934; Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6Z310.2 GenPept UniProtKB/Swiss-Prot:Q6Z310

Gene LinkOut

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