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CG12885 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43308, updated on 5-Jul-2025
Official Symbol
CG12885provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0039523
Locus tag
Dmel_CG12885
See related
AllianceGenome:FB:FBgn0039523
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12885
Summary
Predicted to be part of Set1C/COMPASS complex. [provided by Alliance of Genome Resources, Jul 2025]
Orthologs
all
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See CG12885 in Genome Data Viewer
Location:
98A3-98A4; 3-94 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (27520866..27533934)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (23346588..23359656)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR46086 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44289 Neighboring gene long non-coding RNA:CR44288

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Retrotransposon-gene associations are widespread among D. melanogaster populations. Franchini LF, et al. Mol Biol Evol, 2004 Jul. PMID 15014149
  2. Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome. Lipatov M, et al. BMC Biol, 2005 Nov 12. PMID 16283942, Free PMC Article
  3. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
  4. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

mobile_element

  • Loc: 27521213-27530363 mobile_element_type = transposon:roo{}1701

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
part_of Set1C/COMPASS complex IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
uncharacterized protein
Names
CG12885-PC
CG12885-PD
NP_651567.3
  • non-AUG (AUC) translation initiation

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    27520866..27533934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001276083.1 → NP_001263012.2  uncharacterized protein Dmel_CG12885, isoform C

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KH42, S5LS05
    Conserved Domains (1) summary
    COG1196
    Location:4 → 109
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. NM_143310.3 → NP_651567.3  uncharacterized protein Dmel_CG12885, isoform D

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VB27, S5LS05
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4KH42 A0A0B4KH42
Q8SYB6 Q8SYB6
Q9VB27 Q9VB27

Gene LinkOut

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